We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
ATP5MC1
SECTIONS
  • TISSUE
  • BRAIN
  • SINGLE CELL TYPE
  • TISSUE CELL TYPE
  • PATHOLOGY
  • DISEASE
  • IMMUNE CELL
  • BLOOD PROTEIN
  • SUBCELLULAR
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
  • SARS-COV-2
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Cluster
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Interacting gene
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • TISSUE CELL

  • PATHOLOGY

  • DISEASE

  • IMMUNE

  • BLOOD

  • SUBCELL

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • ATP5MC1
TISSUE SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:141.7 nTPM
HPA Brain:90.6 nTPM
GTEx:141.7 nTPM
FANTOM5:17.9 Scaled Tags Per Million
Pig:90.7 nTPM

SPINAL CORD - Annotated protein expression
Pending normal tissue analysis

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 90.6
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 84.3
1981 Female, age 72, midline 104.9
2565 Male, age 75, midline 95.0
2194 Female, age 79, both hemispheres 85.5
2816 Male, age 47, midline 71.2
2048 Male, age 55, midline 65.0
Cervical spinal cord, dorsal horn
nTPM: 90.6
2173 Female, age 72, unknown 104.8
2069 Male, age 47, both hemispheres 102.0
2296 Male, age 66, both hemispheres 90.4
2721 Male, age 90, both hemispheres 84.4
2297 Male, age 75, both hemispheres 81.6
1877 Male, age 55, unknown 80.2
Cervical spinal cord, ventral horn
nTPM: 82.4
2480 Male, age 75, both hemispheres 88.8
2098 Female, age 72, unknown 88.6
2068 Male, age 55, unknown 82.4
2295 Male, age 66, both hemispheres 82.3
2809 Male, age 90, both hemispheres 76.4
2820 Female, age 79, both hemispheres 75.7

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM 141.7
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 141.7
Samples: 159

Max nTPM: 228.4
Min nTPM: 64.5
Std nTPM: 29.1
Median nTPM: 140.7
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 228.4
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 212.7
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 210.7
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 202.5
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 201.2
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 200.5
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 200.2
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 198.6
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 198.1
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 197.5
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 192.9
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 186.5
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 184.8
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 182.4
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 181.2
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 180.2
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 178.6
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 178.1
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 177.8
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 175.4
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 175.1
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 174.1
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 173.7
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 172.8
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 172.7
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 171.7
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 170.9
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 170.7
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 168.7
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 168.2
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 167.7
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 166.1
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 164.0
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 163.1
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 162.8
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 161.7
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 161.5
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 160.3
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 160.1
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 159.7
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 159.1
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 158.4
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 157.6
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 157.1
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 156.5
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 154.7
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 154.4
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 154.2
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 153.7
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 153.7
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 153.7
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 152.9
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 152.0
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 151.8
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 151.4
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 151.0
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 148.3
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 148.3
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 147.8
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 147.7
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 147.4
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 147.0
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 146.4
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 146.2
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 146.2
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 146.2
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 146.1
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 145.7
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 145.3
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 144.8
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 144.4
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 143.7
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 143.3
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 143.1
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 142.9
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 142.5
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 142.2
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 142.0
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 140.7
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 140.7
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 140.5
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 139.7
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 139.7
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 139.3
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 138.8
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 138.7
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 138.0
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 137.5
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 137.0
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 136.5
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 135.6
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 134.7
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 134.5
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 133.0
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 132.5
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 132.1
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 132.1
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 132.0
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 131.6
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 130.8
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 129.9
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 129.6
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 129.3
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 129.1
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 129.1
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 128.9
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 128.5
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 127.9
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 127.6
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 126.9
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 126.2
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 125.9
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 125.8
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 125.0
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 123.5
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 122.8
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 120.1
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 119.9
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 119.4
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 119.2
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 119.0
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 118.6
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 118.6
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 118.4
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 118.4
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 118.0
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 117.1
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 116.3
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 116.2
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 116.1
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 115.2
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 114.9
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 113.3
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 112.3
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 111.2
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 111.0
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 110.6
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 110.3
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 110.2
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 110.1
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 108.3
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 106.7
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 106.7
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 106.3
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 105.6
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 103.8
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 103.6
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 100.6
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 99.7
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 97.5
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 97.1
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 95.4
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 94.7
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 94.4
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 92.2
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 90.6
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 89.5
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 83.6
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 64.5
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max Scaled Tags Per Million 17.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 17.9
FF:10181-103D1 60 years, female 24.9
FF:10159-103A6 76 years, female 10.8

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM 90.7
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 75.1
Samples: 4

Max nTPM: 81.9
Min nTPM: 61.4
Sample A Female 81.9
Sample B Female 61.4
Sample C Male 75.4
Sample D Male 81.8
Ventral spinal cord
nTPM: 90.7
Samples: 4

Max nTPM: 97.8
Min nTPM: 82.2
Sample A Female 82.2
Sample B Female 97.8
Sample C Male 97.0
Sample D Male 85.9

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org